1. Siegel JN, Egerton M, Phillips AF, Samelson LE: Multiple signal transduction pathways activated through the T-cell receptor for antigen, Current Topics in T-cell Antigen Research. Seminars in Immunology 3: 325-329, 1991.
2. Sarosi GA, Thomas PM, Egerton M, Phillips AF, Kim KW, Bonvini E, Samelson LE: Characterization of the T-cell antigen receptor–p60fyn protein tyrosine kinase association by chemical cross-linking. International Immunology 4(11):1211-1217, 1992.
3. Phillips AF, Szerenyi K, Campos M, Krueger RR, McDonnell PJ: Arachidonic acid metabolites after excimer laser corneal surgery. Arch Ophthalmol 111:1273-1278, 1993.
4. Phillips AF, Hayashi S, Seitz B, Wee WR, McDonnell PJ: Effect of diclofenac, ketorolac, and fluorometholone on arachidonic acid metabolites following excimer laser corneal surgery. Arch Ophthalmol 114:1495-1498, 1996.
5. Phillips AF, McDonnell PJ: Laser-induced fluorescence during photorefractive keratectomy: A method for controlling epithelial removal. Am J Ophthalmol 123:42-47, 1997.
6. Phillips, AF: Ten Years After Photorefractive Keratectomy and Laser In Situ Keratomileusis for Moderate to High Myopia ( Control-Matched Study) Evidence-Based Ophthalmology; April 2010 Vol. 11 (2)  pp 86-87

Non-Peer Review

1. Phillips AF, McDonnell PJ: Voltaren controls ocular inflammation, miosis. Ocular Surgery News IE, February, 1995.
2. Phillips AF, McDonnell P.J.: How to Fine-Tune Your Post-PRK Medications. Review of Ophthalmology 3(10):129-132, 1996.
3. Phillips AF, McDonnell PJ: Perfecting the View. USC Health 11 – 13 Spring 2001
4. Phillips AF: Minimizing Vitreous Loss. Audio-Digest Ophthalmology 40:07 April 7, 2002

Book Chapters

1. Samelson LE, Siegel JN, Phillips AF, Minami Y, Klausner RD, Fletcher MC. In: Alt, FJ, Vogel H, eds.Molecular Mechanisms of Immunological Self Recognition: T-cell Antigen Receptor; Biochemical Aspects of Signal Transduction, 55-68, Academic Press, NY, 1993.
2. Phillips AF. The Association of the fyn Tyrosine Kinase with the T-Cell Antigen Receptor, Yale University Medical School Thesis, 1992.
3. Phillips AF. A Biochemical Analysis of Calmodulin and Trifluoperazine Photoadducts, Amherst College Honors Thesis, magna cum laude, 1987.

Activities at Scientific/Clinical Meetings:

1. Featured symposia, Association of the fyn protein tyrosine kinase with the T-cell antigen receptor, American Federation of Clinical Research National Meeting, Washington D.C., 1990.
2. Arachidonic Acid Metabolites in Rabbit Cornea Following Excimer Laser Ablation, ARVO, Sarasota, Florida, 1993.
3. Inflammation Following Photorefractive Keratectomy: The Role of Non-steroidal Anti-inflammatory Drugs, Pacific Coast Refractive Symposium, Whistler, British Columbia, 1995.
4. Laser-induced Fluorescence During Photorefractive Keratectomy as Measured by a Charge-Coupled Device, Innovators Session, American Society of Cataract and Refractive Surgeons National Meeting, Seattle 1996.
5. Fundamentals of Phacoemulsification- Residents Course, Presented at USC/Doheny Eye Institute, Los Angeles, California, 1997
6. LASIK at USC: Initial experience, Presented at USC/Doheny Eye Institute, Los Angeles, California, 1998
7. Invited lecturer for the XXVI Annual Course, September ’99 Meeting, FOA Fundacion Oftalmologica Argentina, Buenos Aires, Argentina.
8. Director: Advances in Cataract Surgery and Control of Postoperative Astigmatism. Presented at USC/Doheny Eye Institute, Los Angeles, California, May 2000
9. Invited lecturer: Preventing Vitreous Loss. Presented at USC/Doheny Eye Institute, Los Angeles, California, May 2000
10. Invited lecturer: The Toric Intraocular Lens. Presented at USC/Doheny Eye Institute, Los Angeles, California, May 2000
11. Common Eye Problems in Primary Care – 2000, 26th Annual Review Course, Department of Family Medicine and the Los Angeles County Chapter California Academy of Family Physicians, Los Angeles, California 2000.
12. Invited lecturer for the Centro De Ophthalmologia Course, November 2000 Meeting, Sao Paulo, Brazil
13. Role of Prostaglandins in Refractive Surgery, Presented at the Phoenix Ophthalmological Society, Phoenix, Arizona, January 2001
14. Phaco-chop Techniques, Presented at the Phoenix Ophthalmological Society, Phoenix, Arizona January 2001
15. Invited lecturer: Phaco-chop: Reducing Phaco Energy, Managing Hard Nuclei and Small Pupils of Managing Common and Complicated Cataract Conditions. Presented at USC/Doheny Eye Institute, Los Angeles, California, March 2001
16. Director of Issues in Refractive Surgery. Presented at USC/Doheny Eye Institute, Los Angeles, California, April 2001
17. Moderator of Refractive Surgery section for the 32nd Annual Doheny Days and Alumni/ Residents Conference. Presented at USC/Doheny Eye Institute, Los Angeles, California, June 2001
18. Invited lecturer of Screening for Topographical Abnormalities in LASIK Candidates for the 32nd Annual Doheny Days and Alumni/ Residents Conference. Presented at USC/Doheny Eye Institute, Los Angeles, California, June 2001
19. Director of Complications and Management of Refractive Surgery Patients. Presented at USC/Doheny Eye Institute, Los Angeles, California, February 2002.
20. Lecturer of IOL Calculations Following LASIK. Presented at USC/Doheny Eye Institute, Los Angeles, California, February 2002.
21. Lecturer: A New Method for Staining the Anterior Capsule Prior to Capsularrhexus of Mature Cataracts. Presented at USC/Doheny Eye Institute, Los Angeles, California, February 2003.
22. Lecturer: Common Problems in Primary Care – 2003: New Interventions in Refractive Surgery. USC Department of Family Medicine, Presented at the Doheny Eye Institute, Los Angeles, CA, April 2003.
23. Director: New Technology in Cataract Surgery. Presented at USC/Doheny Eye Institute, Los Angeles, California, December 2003
24. Lecturer: Update: IOL Calculations Following Refractive Surgery. Presented at USC/Doheny Eye Institute, Los Angeles, California, December 2003
25. Presentation: “Visco-Shell” Staining Technique of the Anterior Capsule for Mature White Cataracts. R.R. Lim, A. Phillips. Fort Lauderdale, Florida. ARVO, April 2004
26. Invited Lecturer “ Emerging IOL Technologies and Accommodating IOL Design” Presented to the San Gabriel Valley Optometric Society, November 2005
27. Invited Lecturer “ New Imaging Modalities for Detecting Glaucoma Earlier” Presented to the San Gabriel Valley Optometric Society, November 2005
28. Associate Examiner
    Oral Boards
    American Board of Ophthalmology
    June, 2006, San Francisco
29. Invited Lecturer “ Latest Developments in LASIK Procedures”
    Amherst College
    Amherst, Mass.
    June 2, 2007
30. Invited Lecturer “ Latest Developments in LASIK Procedures”
    Amherst College
    Amherst, Mass.
    June 2, 2007
31. Invited Lecturer “ New Approaches to Lamellar Keratitis Prevention”
    Eye On 2007
    Retina Institute of California
    October, 2007
32. Associate Examiner
    Oral Boards
    American Board of Ophthalmology
    June, 2008, San Francisco
33. Invited Lecturer “Recent Advances in Cataract Treatment”
    Church of the Good Shepherd
    Arcadia, California
    December, 2008
34. Lecture Series on Reducing Cataract Surgery Complications,
    ORBIS Flying Eye Hospital Mission
    Bangladesh, October 2009
35. Associate Examiner
    Oral Boards
    American Board of Ophthalmology
    June, 2010, San Francisco
36. Associate Examiner
    Oral Boards
    American Board of Ophthalmology
    June, 2012, San Francisco
37. Associate Examiner
    Oral Boards
    American Board of Ophthalmology
    October, 2012, San Francisco
38. Mentor Examiner
    Oral Boards
    American Board of Ophthalmology
    October, 2013, Chicago
39. Associate Examiner
    Oral Boards
    American Board of Ophthalmology
    November 2014, San Francisco
40. Invited Lecturer
    Accommodative Intraocular Lens Design
    Ophthalmology Innovation Summit OIS@ASCRS
    April 2015, San Diego